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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Groundnut-RIL-6
(Reference Set)
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Maps RIL-6_LG07
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Feature Types:
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Correspondence		 Always Display
SSR
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Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Image Type: PNG JPEG GIF SVG *
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Size of Dot Plot Pixels: 1
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Same Scale:		 No Yes
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Menu Order of Comparative Maps: Predefined
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Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-6 [ View Map Set Info ]
Map Name: RIL-6_LG07
Map Start: 0.00 cM
Map Stop: 31.00 cM
Features by Type:
7 SSR
7 Total

Map Features

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Items 1 to 7 of 7.
Groundnut - RIL-6 - RIL-6_LG07
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC7H11-1 SSR 0.00 No other positions
TC4A02 SSR 5.20 Groundnut - Ref. consensus genetic map - b10 TC4A02 SSR 49.06 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG13 TC4A02 SSR 28.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG13 TC4A02 SSR 96.26 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 TC4A02 SSR 82.86 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-6_LG7 TC4A02 SSR 7.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-2_LG13 TC4A02 SSR 28.00 (cM) Automated name-based View Maps
GA156 SSR 9.70 Groundnut - combined_corresponding_b10 - RIL-7_LG7 GA156 SSR 27.40 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b10 GA156 SSR 44.40 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG07 GA156 SSR 25.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-6_LG7 GA156 SSR 11.40 (cM) Automated name-based View Maps
AC2B03 SSR 15.20 Groundnut - RIL-8 - RIL-8_LG07 AC2B03 SSR 8.00 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b10 AC2B03 SSR 44.40 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - BC-1_a10 AC2B03 SSR 9.70 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 AC2B03 SSR 76.37 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG07 AC2B03 SSR 29.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG16 AC2B03 SSR 13.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-8_LG7 AC2B03 SSR 5.80 (cM) Automated name-based View Maps
TC11A02 SSR 19.50 Groundnut - Ref. consensus genetic map - b10 TC11A02 SSR 42.55 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-6_LG7 TC11A02 SSR 12.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-7_LG7 TC11A02 SSR 29.10 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG07 TC11A02 SSR 35.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GA131 SSR 27.30 Groundnut - combined_corresponding_a10 - RIL-8_LG7 GA131 SSR 15.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 GA131 SSR 84.57 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b10 GA131 SSR 62.13 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-8 - RIL-8_LG07 GA131 SSR 20.10 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG07 GA131 SSR 11.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
seq3E10 SSR 31.00 Groundnut - Consensus_Biotic - LG12 seq3E10 SSR 7.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-7_LG10 seq3E10 SSR 37.50 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG12 seq3E10 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG10 seq3E10 SSR 30.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b10 seq3E10 SSR 30.35 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-10_LG10 seq3E10 SSR 3.40 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG12 seq3E10 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 seq3E10 SSR 3.28 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG12 seq3E10 SSR 9.80 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-1_LG12 seq3E10 SSR 0.00 (cM) Automated name-based View Maps