CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-RIL-10
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps RIL-10_LG08
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-10 [ View Map Set Info ]
Map Name: RIL-10_LG08
Map Start: 0.00 cM
Map Stop: 100.30 cM
Features by Type:
12 SSR
12 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 12 of 12.
Groundnut - RIL-10 - RIL-10_LG08
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC9B08 SSR 0.00 Groundnut - combined_corresponding_a08 - RIL-4_LG19 TC9B08 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a08 TC9B08 SSR 0.00 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG02 TC9B08 SSR 84.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-2_LG8 TC9B08 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a08 - BC-1_a08 TC9B08 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG19 TC9B08 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG08 TC9B08 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-9_LG8 TC9B08 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG10 TC9B08 SSR 25.42 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-3_LG8 TC9B08 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-6_LG2 TC9B08 SSR 68.40 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG08 TC9B08 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Biotic - LG19 TC9B08 SSR 8.61 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM2788 SSR 9.20 Groundnut - Ref. consensus genetic map - a08 GM2788 SSR 3.80 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-9_LG8 GM2788 SSR 3.80 (cM) Automated name-based View Maps
TC3B05 SSR 18.30 Groundnut - Ref. consensus genetic map - a08 TC3B05 SSR 10.90 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 TC3B05 SSR 133.27 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-2_LG13 TC3B05 SSR 51.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-4_LG19 TC3B05 SSR 7.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-9_LG8 TC3B05 SSR 10.90 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG19 TC3B05 SSR 7.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b07 - BC-1_b07 TC3B05 SSR 31.40 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b07 TC3B05 SSR 85.36 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - BC-1_a08 TC3B05 SSR 2.40 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG02 TC3B05 SSR 92.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-6_LG2 TC3B05 SSR 74.20 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG19 TC3B05 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG13 TC3B05 SSR 119.86 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG13 TC3B05 SSR 51.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM2289 SSR 30.50 Groundnut - Ref. consensus genetic map - a08 GM2289 SSR 29.10 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-9_LG8 GM2289 SSR 29.10 (cM) Automated name-based View Maps
ARS795 SSR 38.20 Groundnut - Ref. consensus genetic map - b07 ARS795 SSR 80.32 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-9_LG8 ARS795 SSR 32.20 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a08 ARS795 SSR 32.20 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b07 - RIL-9_LG17 ARS795 SSR 75.60 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG17 ARS795 SSR 83.70 (cM) Automated name-based, Synteny, Automated name-based View Maps
TC7A02 SSR 43.60 Groundnut - RIL-1 - RIL-1_LG18 TC7A02 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a08 TC7A02 SSR 38.40 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-7_LG2 TC7A02 SSR 47.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b07 - RIL-10_LG17 TC7A02 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG02 TC7A02 SSR 62.20 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG02 TC7A02 SSR 55.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b07 - BC-1_b07 TC7A02 SSR 34.40 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG17 TC7A02 SSR 82.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b07 TC7A02 SSR 100.12 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG18 TC7A02 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-6_LG2 TC7A02 SSR 50.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-9_LG8 TC7A02 SSR 38.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a08 - BC-1_a08 TC7A02 SSR 10.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b07 - RIL-1_LG18 TC7A02 SSR 0.00 (cM) Automated name-based View Maps
seq3A8 SSR 50.20 Groundnut - RIL-7 - RIL-7_LG02 seq3A8 SSR 41.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG02 seq3A8 SSR 52.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-8 - RIL-8_LG01 seq3A8 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1901 SSR 53.90 Groundnut - Consensus_Abiotic - LG16 GM1901 SSR 2.21 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-9_LG8 GM1901 SSR 47.70 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a08 GM1901 SSR 46.56 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG16 GM1901 SSR 47.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
ARS800 SSR 60.10 Groundnut - combined_corresponding_a08 - RIL-9_LG8 ARS800 SSR 50.40 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a08 ARS800 SSR 59.29 (cM) Automated name-based, Automated name-based View Maps
GM1760 SSR 66.80 Groundnut - Ref. consensus genetic map - b08 GM1760 SSR 23.10 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b08 - RIL-9_LG18 GM1760 SSR 13.50 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG08 GM1760 SSR 50.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG18 GM1760 SSR 29.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG08 GM1760 SSR 77.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a08 GM1760 SSR 67.42 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b08 - RIL-4_LG8 GM1760 SSR 50.50 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-9_LG8 GM1760 SSR 59.10 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG18 GM1760 SSR 40.30 (cM) Automated name-based, Synteny, Automated name-based View Maps
Groundnut - combined_corresponding_b08 - RIL-5_LG8 GM1760 SSR 77.90 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG08 GM1760 SSR 38.67 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b08 - RIL-10_LG18 GM1760 SSR 32.60 (cM) Automated name-based View Maps
TC6H03 SSR 75.50 Groundnut - RIL-6 - RIL-6_LG02 TC6H03 SSR 33.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - BC-1_a08 TC6H03 SSR 34.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b08 - RIL-5_LG8 TC6H03 SSR 72.40 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG08 TC6H03 SSR 77.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG08 TC6H03 SSR 77.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Biotic - LG08 TC6H03 SSR 31.85 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG08 TC6H03 SSR 72.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b08 - BC-1_b08 TC6H03 SSR 6.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a08 TC6H03 SSR 79.58 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-7_LG2 TC6H03 SSR 26.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b08 - RIL-1_LG8 TC6H03 SSR 77.40 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b08 TC6H03 SSR 47.96 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-9_LG8 TC6H03 SSR 69.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b08 - RIL-4_LG8 TC6H03 SSR 41.50 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG02 TC6H03 SSR 29.40 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-6_LG2 TC6H03 SSR 24.50 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG08 TC6H03 SSR 41.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1628 SSR 100.30 Groundnut - Ref. consensus genetic map - a08 GM1628 SSR 102.08 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a08 - RIL-9_LG8 GM1628 SSR 90.60 (cM) Automated name-based View Maps