CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-RIL-10
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps RIL-10_LG10
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-10 [ View Map Set Info ]
Map Name: RIL-10_LG10
Map Start: 0.00 cM
Map Stop: 72.20 cM
Features by Type:
12 SSR
12 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 12 of 12.
Groundnut - RIL-10 - RIL-10_LG10
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM692 SSR 0.00 Groundnut - combined_corresponding_a10 - RIL-10_LG10 GM692 SSR 18.83 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG10 GM692 SSR 30.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG12 GM692 SSR 88.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-2_LG12 GM692 SSR 88.50 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-9_LG10 GM692 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-4_LG16 GM692 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG16 GM692 SSR 0.00 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG12 GM692 SSR 91.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Biotic - LG16 GM692 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG12 GM692 SSR 158.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 GM692 SSR 130.41 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-1_LG12 GM692 SSR 91.10 (cM) Automated name-based View Maps
RM11H1 SSR 12.90 Groundnut - combined_corresponding_a10 - RIL-9_LG10 RM11H1 SSR 12.91 (cM) Automated name-based View Maps
ARS775 SSR 21.30 Groundnut - combined_corresponding_a10 - RIL-9_LG10 ARS775 SSR 23.81 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 ARS775 SSR 104.05 (cM) Automated name-based, Automated name-based View Maps
ARS812 SSR 26.50 Groundnut - Ref. consensus genetic map - a10 ARS812 SSR 97.68 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-9_LG10 ARS812 SSR 30.11 (cM) Automated name-based View Maps
ARS785 SSR 28.60 Groundnut - Ref. consensus genetic map - a10 ARS785 SSR 97.06 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-9_LG10 ARS785 SSR 30.51 (cM) Automated name-based View Maps
ARS798 SSR 30.70 Groundnut - combined_corresponding_a10 - RIL-9_LG10 ARS798 SSR 30.51 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 ARS798 SSR 97.06 (cM) Automated name-based, Automated name-based View Maps
ARS773 SSR 32.60 Groundnut - Ref. consensus genetic map - a10 ARS773 SSR 97.06 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-9_LG10 ARS773 SSR 30.51 (cM) Automated name-based View Maps
IPAHM352 SSR 34.50 Groundnut - Consensus_Biotic - LG04 IPAHM352 SSR 55.46 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-5_LG4 IPAHM352 SSR 120.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-10_LG10 IPAHM352 SSR 25.86 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG10 IPAHM352 SSR 30.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-9_LG10 IPAHM352 SSR 32.91 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b05 IPAHM352 SSR 4.31 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 IPAHM352 SSR 94.66 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG04 IPAHM352 SSR 120.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
IPAHM75 SSR 36.90 Groundnut - RIL-2 - RIL-2_LG13 IPAHM75 SSR 32.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-2_LG13 IPAHM75 SSR 32.80 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-9_LG10 IPAHM75 SSR 33.51 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 IPAHM75 SSR 84.10 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 IPAHM75 SSR 88.34 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Biotic - LG04 IPAHM75 SSR 45.61 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG04 IPAHM75 SSR 109.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b05 IPAHM75 SSR 12.57 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-5_LG4 IPAHM75 SSR 109.90 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG13 IPAHM75 SSR 101.06 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
seq11D4 SSR 41.20 Groundnut - RIL-6 - RIL-6_LG10 seq11D4 SSR 11.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG10 seq11D4 SSR 18.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM2411 SSR 44.40 Groundnut - combined_corresponding_a10 - RIL-9_LG10 GM2411 SSR 52.11 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 GM2411 SSR 57.61 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-10_LG10 GM2411 SSR 28.06 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG10 GM2411 SSR 30.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
GM1788 SSR 72.20 Groundnut - combined_corresponding_a10 - RIL-9_LG10 GM1788 SSR 78.51 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 GM1788 SSR 2.58 (cM) Automated name-based, Automated name-based View Maps