CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-RIL-10
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps RIL-10_LG02
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-10 [ View Map Set Info ]
Map Name: RIL-10_LG02
Map Start: 0.00 cM
Map Stop: 27.60 cM
Features by Type:
11 SSR
11 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 11 of 11.
Groundnut - RIL-10 - RIL-10_LG02
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
PM32 SSR 0.00 Groundnut - RIL-7 - RIL-7_LG03 PM32 SSR 29.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b02 - RIL-6_LG3 PM32 SSR 32.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a02 PM32 SSR 44.04 (cM) Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b02 PM32 SSR 99.70 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG03 PM32 SSR 26.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a02 - BC-1_a02 PM32 SSR 6.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b02 - RIL-7_LG3 PM32 SSR 14.80 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG02 PM32 SSR 55.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b02 - BC-1_b02 PM32 SSR 3.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b02 - RIL-10_LG12 PM32 SSR 12.60 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG12 PM32 SSR 39.90 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Ah41 SSR 6.20 Groundnut - RIL-8 - RIL-8_LG13 Ah41 SSR 7.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
ARS748 SSR 8.20 Groundnut - RIL-9 - RIL-9_LG21 ARS748 SSR 23.50 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG02 ARS748 SSR 55.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
seq1B9 SSR 10.10 Groundnut - RIL-6 - RIL-6_LG11 seq1B9 SSR 41.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG11 seq1B9 SSR 3.50 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
PM200 SSR 11.10 No other positions
seq2G4 SSR 13.40 Groundnut - RIL-6 - RIL-6_LG03 seq2G4 SSR 34.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG03 seq2G4 SSR 20.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG02 seq2G4 SSR 55.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
seq4E08 SSR 14.50 Groundnut - combined_corresponding_b02 - RIL-6_LG3 seq4E08 SSR 51.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b02 - RIL-7_LG3 seq4E08 SSR 5.90 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b02 seq4E08 SSR 162.81 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG03 seq4E08 SSR 18.10 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG03 seq4E08 SSR 40.40 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
ARS796 SSR 17.00 No other positions
ARS783 SSR 19.60 No other positions
Ah26 SSR 23.30 Groundnut - RIL-9 - RIL-9_LG02 Ah26 SSR 55.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b02 Ah26 SSR 150.63 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b02 - RIL-1_LG2 Ah26 SSR 41.70 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG02 Ah26 SSR 41.70 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG02 Ah26 SSR 43.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
RI1F06 SSR 27.60 Groundnut - combined_corresponding_b02 - RIL-7_LG3 RI1F06 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b02 - RIL-1_LG2 RI1F06 SSR 57.60 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b02 RI1F06 SSR 80.30 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG02 RI1F06 SSR 57.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG02 RI1F06 SSR 64.30 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG03 RI1F06 SSR 29.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b02 - BC-1_b02 RI1F06 SSR 12.10 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a02 RI1F06 SSR 17.90 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a02 - BC-1_a02 RI1F06 SSR 9.30 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b02 - RIL-6_LG3 RI1F06 SSR 33.30 (cM) Automated name-based View Maps