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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-RIL-10
(Reference Set)
Min.
Correspondences
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Maps RIL-10_LG20
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-10 [ View Map Set Info ]
Map Name: RIL-10_LG20
Map Start: 0.00 cM
Map Stop: 14.00 cM
Features by Type:
6 SSR
6 Total

Map Features

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Items 1 to 6 of 6.
Groundnut - RIL-10 - RIL-10_LG20
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM695 SSR 0.00 Groundnut - RIL-2 - RIL-2_LG14 GM695 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a02 - RIL-3_LG2 GM695 SSR 4.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a02 GM695 SSR 43.99 (cM) Automated name-based, Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG02 GM695 SSR 4.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG02 GM695 SSR 48.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a02 - RIL-2_LG14 GM695 SSR 0.00 (cM) Automated name-based View Maps
ARS797 SSR 3.40 No other positions
GM618 SSR 5.50 Groundnut - RIL-2 - RIL-2_LG20 GM618 SSR 189.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG03 GM618 SSR 137.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a03 GM618 SSR 209.56 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a03 - RIL-2_LG20 GM618 SSR 189.80 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG03 GM618 SSR 133.19 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_a03 - RIL-1_LG3 GM618 SSR 137.80 (cM) Automated name-based View Maps
seq11G7 SSR 7.90 Groundnut - RIL-7 - RIL-7_LG11 seq11G7 SSR 4.60 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG11 seq11G7 SSR 38.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
ARS741 SSR 10.60 No other positions
ARS808 SSR 14.00 No other positions