CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-RIL-10
(Reference Set) 		Groundnut-RIL-8
Min.
Correspondences
Align Vertically
Stack
Maps RIL-10_LG22 RIL-8_LG09
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - RIL-10 [ View Map Set Info ]
Map Name: RIL-10_LG22
Map Start: 0.00 cM
Map Stop: 3.10 cM
Features by Type:
2 SSR
2 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 2 of 2.
Groundnut - RIL-10 - RIL-10_LG22
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
GM2120 SSR 0.00 Groundnut - combined_corresponding_b09 - RIL-4_LG9 GM2120 SSR 74.60 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b09 GM2120 SSR 73.06 (cM) Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b09 - RIL-9_LG22 GM2120 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG09 GM2120 SSR 35.90 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b09 - RIL-1_LG9 GM2120 SSR 59.80 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG09 GM2120 SSR 74.60 (cM) Synteny, Automated name-based, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG09 GM2120 SSR 59.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - Consensus_Biotic - LG09 GM2120 SSR 40.54 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG09 GM2120 SSR 59.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - combined_corresponding_b09 - RIL-5_LG9 GM2120 SSR 35.90 (cM) Automated name-based View Maps
seq7G2 SSR 3.10 Groundnut - RIL-9 - RIL-9_LG22 seq7G2 SSR 17.20 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG18 seq7G2 SSR 25.80 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-8 - RIL-8_LG09 seq7G2 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG18 seq7G2 SSR 0.00 (cM) Automated name-based, Synteny, Automated name-based, Automated name-based View Maps