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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-BC-1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps BC-1_a03
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - BC-1 [ View Map Set Info ]
Map Name: BC-1_a03
Map Start: 0.00 cM
Map Stop: 58.00 cM
Features by Type:
27 SSR
27 Total

Map Features

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Items 1 to 25 of 27.       of 2 | Next
Groundnut - BC-1 - BC-1_a03
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Ah3TC31H02_A SSR 0.00 No other positions
TC4G02_A SSR 7.00 No other positions
gi_0560_A SSR 9.60 No other positions
Seq19H03_A1 SSR 10.30 Groundnut - Ref. consensus genetic map - a03 seq19H03_A1 SSR 237.35 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a03 - BC-1_a03 seq19H03_A1 SSR 10.30 (cM) Automated name-based View Maps
Ah_30_A SSR 14.80 No other positions
Ah3TC41C11_A SSR 17.80 No other positions
Seq2C11_A SSR 19.60 No other positions
PM003_A SSR 19.60 No other positions
PM201_A SSR 22.50 No other positions
PM015_A1 SSR 22.50 No other positions
TC0A01_A SSR 22.50 No other positions
PM042_A2 SSR 23.70 No other positions
gi_4925_A SSR 31.00 No other positions
TC2C07_A SSR 34.40 No other positions
PM238_A SSR 34.40 No other positions
Ah_636_A SSR 37.90 No other positions
Ah3TC39C01_A SSR 37.90 No other positions
Seq18G09_A2 SSR 39.70 Groundnut - combined_corresponding_a03 - BC-1_a03 seq18G09_A2 SSR 39.70 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a03 seq18G09_A2 SSR 110.07 (cM) Automated name-based View Maps
TC1E06_A SSR 41.50 No other positions
Ag140_A SSR 41.50 No other positions
TC11E04_A SSR 41.50 No other positions
Seq13E06A_A SSR 42.10 No other positions
Ah3TC22G05_A SSR 42.10 No other positions
Seq3D09_A SSR 46.10 No other positions
Seq4F10_A SSR 55.80 No other positions