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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-BC-1
(Reference Set)
Min.
Correspondences
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Maps BC-1_a06
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - BC-1 [ View Map Set Info ]
Map Name: BC-1_a06
Map Start: 0.00 cM
Map Stop: 32.00 cM
Features by Type:
21 SSR
21 Total

Map Features

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Items 1 to 21 of 21.
Groundnut - BC-1 - BC-1_a06
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Seq19H03_A2 SSR 32.00 Groundnut - combined_corresponding_a06 - BC-1_a06 seq19H03_A2 SSR 32.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a06 seq19H03_A2 SSR 228.40 (cM) Automated name-based View Maps
gi-0936_A SSR 26.10 No other positions
gi-0623_A SSR 26.10 No other positions
Seq18G01_A SSR 25.60 No other positions
Ah3TC19B03_A SSR 19.20 No other positions
TC1A02_A SSR 15.70 No other positions
TC11A04_A SSR 15.70 No other positions
Ah3TC38A07_A SSR 14.90 No other positions
TC9C06_A SSR 12.80 No other positions
Seq18A08_A1 SSR 11.80 Groundnut - combined_corresponding_a06 - BC-1_a06 seq18A08_A1 SSR 11.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a06 seq18A08_A1 SSR 87.83 (cM) Automated name-based View Maps
Ah-20_A SSR 10.00 No other positions
Ah3TC28E_A SSR 8.50 No other positions
Seq18G09_A1 SSR 6.40 Groundnut - combined_corresponding_a06 - BC-1_a06 seq18G09_A1 SSR 6.40 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a06 seq18G09_A1 SSR 77.92 (cM) Automated name-based View Maps
PM035_A SSR 5.80 No other positions
RN21H01_A SSR 5.20 No other positions
Seq15D03_A SSR 5.20 No other positions
Seq4H06_A SSR 4.60 No other positions
RN31A05_A SSR 4.60 No other positions
IPAHM659_A SSR 4.00 No other positions
TC3H07_A SSR 1.10 No other positions
AC2H11_A SSR 0.00 No other positions