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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-BC-1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps BC-1_a07
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - BC-1 [ View Map Set Info ]
Map Name: BC-1_a07
Map Start: 0.00 cM
Map Stop: 56.00 cM
Features by Type:
21 SSR
21 Total

Map Features

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Items 1 to 21 of 21.
Groundnut - BC-1 - BC-1_a07
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
RN13D04_A SSR 56.00 No other positions
Seq2E06_A SSR 54.10 No other positions
Seq5D05_A SSR 49.60 No other positions
Ah3TC23E04_A SSR 48.50 No other positions
Ah3TC22D09_A SSR 47.90 No other positions
PM042_A SSR 47.40 No other positions
Ah594_A SSR 38.30 No other positions
Seq14D01_A SSR 37.80 No other positions
IPAHM290_A SSR 37.20 No other positions
IPAHM123_A SSR 37.20 No other positions
Seq3B08_A SSR 35.50 No other positions
Ad90K4_A SSR 35.00 No other positions
seq16G04_A SSR 33.30 No other positions
PM204_A SSR 30.00 No other positions
TC9H08_A SSR 26.50 No other positions
seq3A01_A SSR 26.50 No other positions
TC4G10_A SSR 20.90 No other positions
Ah3TC38F01_A SSR 7.90 No other positions
Seq2A06_A SSR 3.20 No other positions
RM2D04_A SSR 0.30 No other positions
TC6G09_A SSR 0.00 No other positions