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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-BC-1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps BC-1_a10
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - BC-1 [ View Map Set Info ]
Map Name: BC-1_a10
Map Start: 0.00 cM
Map Stop: 20.90 cM
Features by Type:
14 SSR
14 Total

Map Features

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Items 1 to 14 of 14.
Groundnut - BC-1 - BC-1_a10
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
AC3F07_A SSR 0.00 No other positions
PM145_A SSR 6.10 No other positions
Seq9F01_A SSR 9.00 No other positions
AC2B03_A SSR 9.70 No other positions
AC3C02_A SSR 9.70 No other positions
AC1G11_A SSR 9.70 No other positions
seq12F07_A SSR 9.70 No other positions
Ah3TC23D04_B SSR 9.70 No other positions
Ah3TC23F04_A1 SSR 9.70 Groundnut - Ref. consensus genetic map - a10 Ah3TC23F04_A1 SSR 76.37 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - BC-1_a10 Ah3TC23F04_A1 SSR 9.70 (cM) Automated name-based View Maps
seq11D04_A SSR 9.70 No other positions
Seq14F05_A SSR 9.70 No other positions
Seq4H11_A1 SSR 12.60 Groundnut - Ref. consensus genetic map - a10 seq4H11_A1 SSR 73.47 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - BC-1_a10 seq4H11_A1 SSR 12.60 (cM) Automated name-based View Maps
TC1G04_A SSR 16.10 No other positions
TC11B04_A2 SSR 20.90 No other positions