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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Groundnut-combined_corresponding_a01
(Reference Set)
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Correspondences
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Maps RIL-5_LG19
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - combined_corresponding_a01 [ View Map Set Info ]
Map Name: RIL-5_LG19
Map Start: 0.00 cM
Map Stop: 14.80 cM
Features by Type:
3 SSR
3 Total

Map Features

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Items 1 to 3 of 3.
Groundnut - combined_corresponding_a01 - RIL-5_LG19
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
seq16G08 SSR 14.80 Groundnut - Ref. consensus genetic map - b01 seq16G08 SSR 273.39 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-7_LG8 seq16G08 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG19 seq16G08 SSR 14.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 seq16G08 SSR 50.25 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG15 seq16G08 SSR 31.90 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 seq16G08 SSR 135.24 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-1_LG15 seq16G08 SSR 31.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-8_LG8 seq16G08 SSR 33.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - BC-1_a01 seq16G08 SSR 36.50 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-6_LG8 seq16G08 SSR 16.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - BC-1_b01 seq16G08 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-10_LG9 seq16G08 SSR 17.40 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG15 seq16G08 SSR 31.90 (cM) Automated name-based View Maps
GM2603 SSR 0.80 Groundnut - Ref. consensus genetic map - a01 GM2603 SSR 91.57 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-1_LG15 GM2603 SSR 14.50 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG15 GM2603 SSR 14.50 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG19 GM2603 SSR 0.80 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG15 GM2603 SSR 14.50 (cM) Automated name-based View Maps
GM2602 SSR 0.00 Groundnut - RIL-5 - RIL-5_LG19 GM2602 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG15 GM2602 SSR 13.80 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-1_LG15 GM2602 SSR 13.80 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG15 GM2602 SSR 13.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 GM2602 SSR 90.82 (cM) Automated name-based View Maps