CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-combined_corresponding_a01
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps BC-1_a01
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - combined_corresponding_a01 [ View Map Set Info ]
Map Name: BC-1_a01
Map Start: 0.00 cM
Map Stop: 56.20 cM
Features by Type:
37 SSR
37 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 37.       of 2 | Next
Groundnut - combined_corresponding_a01 - BC-1_a01
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
gi-0919 SSR 56.20 Groundnut - Ref. consensus genetic map - a01 gi-0919 SSR 164.51 (cM) Automated name-based View Maps
TC2E05 SSR 54.60 Groundnut - Ref. consensus genetic map - b01 TC2E05 SSR 231.15 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-10_LG11 TC2E05 SSR 18.10 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG26 TC2E05 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG11 TC2E05 SSR 24.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 TC2E05 SSR 162.91 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-9_LG26 TC2E05 SSR 0.00 (cM) Automated name-based View Maps
IPAHM287 SSR 52.00 Groundnut - Ref. consensus genetic map - a01 IPAHM287 SSR 150.74 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-9_LG26 IPAHM287 SSR 21.74 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG01 IPAHM287 SSR 20.90 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 IPAHM287 SSR 26.13 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG04 IPAHM287 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 IPAHM287 SSR 239.93 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG04 IPAHM287 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG26 IPAHM287 SSR 21.70 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG04 IPAHM287 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-2_LG4 IPAHM287 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-5_LG1 IPAHM287 SSR 20.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-1_LG4 IPAHM287 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b05 IPAHM287 SSR 15.82 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG15 IPAHM287 SSR 24.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-9_LG15 IPAHM287 SSR 15.70 (cM) Automated name-based View Maps
IPAHM177 SSR 41.20 Groundnut - Ref. consensus genetic map - a01 IPAHM177 SSR 139.94 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b08 IPAHM177 SSR 105.16 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b08 - RIL-1_LG8 IPAHM177 SSR 57.00 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG08 IPAHM177 SSR 57.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b08 - BC-1_b08 IPAHM177 SSR 4.70 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG08 IPAHM177 SSR 57.00 (cM) Automated name-based View Maps
Ah3TC23F04_A2 SSR 40.40 Groundnut - Ref. consensus genetic map - a01 Ah3TC23F04_A2 SSR 139.14 (cM) Automated name-based View Maps
Groundnut - BC-1 - BC-1_a01 Ah3TC23F04_A2 SSR 40.40 (cM) Automated name-based View Maps
seq16G08 SSR 36.50 Groundnut - Consensus_Abiotic - LG15 seq16G08 SSR 31.90 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 seq16G08 SSR 50.25 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-10_LG9 seq16G08 SSR 17.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-1_LG15 seq16G08 SSR 31.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-7_LG8 seq16G08 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG15 seq16G08 SSR 31.90 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG19 seq16G08 SSR 14.80 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-5_LG19 seq16G08 SSR 14.80 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-8_LG8 seq16G08 SSR 33.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - BC-1_b01 seq16G08 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 seq16G08 SSR 135.24 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 seq16G08 SSR 273.39 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-6_LG8 seq16G08 SSR 16.20 (cM) Automated name-based View Maps
RN9A05 SSR 31.90 Groundnut - Ref. consensus genetic map - a01 RN9A05 SSR 130.64 (cM) Automated name-based View Maps
RN23A07 SSR 31.90 Groundnut - Ref. consensus genetic map - a01 RN23A07 SSR 130.64 (cM) Automated name-based View Maps
IPAHM531 SSR 25.80 Groundnut - RIL-5 - RIL-5_LG12 IPAHM531 SSR 26.20 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 IPAHM531 SSR 124.54 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG12 IPAHM531 SSR 12.22 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b10 IPAHM531 SSR 53.48 (cM) Automated name-based View Maps
Ah3TC38C01 SSR 24.40 Groundnut - Ref. consensus genetic map - a01 Ah3TC38C01 SSR 123.14 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b08 Ah3TC38C01 SSR 109.51 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b08 - BC-1_b08 Ah3TC38C01 SSR 1.20 (cM) Automated name-based View Maps
Ai119C17 SSR 23.80 Groundnut - Ref. consensus genetic map - b09 Ai119C17 SSR 29.98 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 Ai119C17 SSR 122.54 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b09 - BC-1_b09 Ai119C17 SSR 28.90 (cM) Automated name-based View Maps
RN11A07 SSR 23.20 Groundnut - Ref. consensus genetic map - a01 RN11A07 SSR 121.94 (cM) Automated name-based View Maps
Ad92L24 SSR 22.60 Groundnut - Ref. consensus genetic map - a01 Ad92L24 SSR 121.34 (cM) Automated name-based View Maps
Ah126 SSR 22.00 Groundnut - combined_corresponding_a01 - RIL-10_LG1 Ah126 SSR 8.73 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - BC-1_b01 Ah126 SSR 26.70 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 Ah126 SSR 64.24 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG01 Ah126 SSR 34.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 Ah126 SSR 120.74 (cM) Automated name-based View Maps
Ah21 SSR 22.00 Groundnut - RIL-9 - RIL-9_LG01 Ah21 SSR 34.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 Ah21 SSR 84.12 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-10_LG1 Ah21 SSR 8.73 (cM) Automated name-based View Maps
seq4B09 SSR 22.00 Groundnut - Ref. consensus genetic map - a01 seq4B09 SSR 120.74 (cM) Automated name-based View Maps
seq13A10 SSR 21.40 Groundnut - Consensus_Abiotic - LG11 seq13A10 SSR 112.64 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-9_LG14 seq13A10 SSR 45.60 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 seq13A10 SSR 44.80 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG14 seq13A10 SSR 42.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 seq13A10 SSR 120.14 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-4_LG11 seq13A10 SSR 81.90 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG11 seq13A10 SSR 81.90 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG11 seq13A10 SSR 38.39 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-1_LG11 seq13A10 SSR 72.10 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG11 seq13A10 SSR 72.10 (cM) Automated name-based View Maps
TC4H02 SSR 21.40 Groundnut - combined_corresponding_a01 - RIL-7_LG8 TC4H02 SSR 26.20 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG08 TC4H02 SSR 22.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-4_LG11 TC4H02 SSR 64.50 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG11 TC4H02 SSR 24.60 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG11 TC4H02 SSR 74.29 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 TC4H02 SSR 85.65 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG11 TC4H02 SSR 64.50 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-5_LG11 TC4H02 SSR 24.60 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG08 TC4H02 SSR 5.80 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-1_LG11 TC4H02 SSR 55.60 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG11 TC4H02 SSR 55.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-6_LG8 TC4H02 SSR 6.10 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG11 TC4H02 SSR 51.86 (cM) Automated name-based View Maps
Ah594_A3 SSR 21.40 Groundnut - Ref. consensus genetic map - a01 Ah594_A3 SSR 76.94 (cM) Automated name-based View Maps
Groundnut - BC-1 - BC-1_a01 Ah594_A3 SSR 21.40 (cM) Automated name-based View Maps
TC2D06 SSR 21.40 Groundnut - combined_corresponding_a01 - RIL-2_LG11 TC2D06 SSR 65.30 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG11 TC2D06 SSR 75.59 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG11 TC2D06 SSR 56.90 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG08 TC2D06 SSR 5.80 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG11 TC2D06 SSR 65.30 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 TC2D06 SSR 97.46 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-10_LG1 TC2D06 SSR 7.33 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-1_LG11 TC2D06 SSR 56.90 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG01 TC2D06 SSR 34.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-6_LG8 TC2D06 SSR 6.10 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG08 TC2D06 SSR 11.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-7_LG8 TC2D06 SSR 9.90 (cM) Automated name-based View Maps
seq3E05 SSR 21.40 Groundnut - Ref. consensus genetic map - a01 seq3E05 SSR 76.94 (cM) Automated name-based View Maps
seq19C03 SSR 21.40 Groundnut - combined_corresponding_b07 - RIL-7_LG9 seq19C03 SSR 29.10 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b07 seq19C03 SSR 58.45 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 seq19C03 SSR 76.94 (cM) Automated name-based View Maps
Ah3TC36D11 SSR 21.40 Groundnut - Ref. consensus genetic map - a01 Ah3TC36D11 SSR 76.94 (cM) Automated name-based View Maps
TC1D01 SSR 21.40 Groundnut - Ref. consensus genetic map - a01 TC1D01 SSR 76.94 (cM) Automated name-based View Maps
Ah193 SSR 21.40 Groundnut - Consensus_Abiotic - LG11 Ah193 SSR 66.79 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-1_LG11 Ah193 SSR 48.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-4_LG11 Ah193 SSR 26.70 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a01 Ah193 SSR 76.94 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG11 Ah193 SSR 64.00 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG11 Ah193 SSR 48.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a01 - RIL-2_LG11 Ah193 SSR 64.00 (cM) Automated name-based View Maps