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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Groundnut-combined_corresponding_a09
(Reference Set)
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Maps RIL-6_LG14
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - combined_corresponding_a09 [ View Map Set Info ]
Map Name: RIL-6_LG14
Map Start: 0.00 cM
Map Stop: 12.10 cM
Features by Type:
3 SSR
3 Total

Map Features

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Items 1 to 3 of 3.
Groundnut - combined_corresponding_a09 - RIL-6_LG14
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
EM-87 SSR 12.10 Groundnut - RIL-6 - RIL-6_LG14 EM-87 SSR 13.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 EM-87 SSR 62.37 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-7_LG14 EM-87 SSR 4.80 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG14 EM-87 SSR 9.70 (cM) Automated name-based View Maps
TC1D02 SSR 9.60 Groundnut - combined_corresponding_a09 - RIL-7_LG14 TC1D02 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b09 - BC-1_b09 TC1D02 SSR 26.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-9_LG9 TC1D02 SSR 16.00 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG04 TC1D02 SSR 210.57 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG13 TC1D02 SSR 53.20 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG13 TC1D02 SSR 23.45 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-4_LG13 TC1D02 SSR 32.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b09 TC1D02 SSR 35.19 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG14 TC1D02 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG04 TC1D02 SSR 188.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-5_LG13 TC1D02 SSR 53.20 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG04 TC1D02 SSR 150.30 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - BC-1_a09 TC1D02 SSR 39.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 TC1D02 SSR 69.50 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG14 TC1D02 SSR 8.50 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG13 TC1D02 SSR 32.80 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG09 TC1D02 SSR 22.60 (cM) Automated name-based View Maps
seq17E03 SSR 0.00 Groundnut - combined_corresponding_a09 - BC-1_a09 seq17E03 SSR 41.90 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG13 seq17E03 SSR 27.20 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG13 seq17E03 SSR 17.38 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-4_LG13 seq17E03 SSR 27.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a09 - RIL-7_LG14 seq17E03 SSR 4.10 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a09 seq17E03 SSR 63.07 (cM) Automated name-based View Maps