CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-combined_corresponding_a10
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps RIL-6_LG10
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - combined_corresponding_a10 [ View Map Set Info ]
Map Name: RIL-6_LG10
Map Start: 0.00 cM
Map Stop: 16.00 cM
Features by Type:
8 SSR
8 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 8 of 8.
Groundnut - combined_corresponding_a10 - RIL-6_LG10
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC7H11-2 SSR 0.00 Groundnut - RIL-6 - RIL-6_LG10 TC7H11-2 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 TC7H11-2 SSR 82.25 (cM) Automated name-based View Maps
GA79 SSR 3.70 Groundnut - Ref. consensus genetic map - a10 GA79 SSR 78.18 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG10 GA79 SSR 2.40 (cM) Automated name-based View Maps
GA57 SSR 3.80 Groundnut - combined_corresponding_a10 - RIL-7_LG10 GA57 SSR 10.20 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG10 GA57 SSR 5.60 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 GA57 SSR 78.08 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG10 GA57 SSR 10.70 (cM) Automated name-based View Maps
GA161 SSR 3.80 Groundnut - combined_corresponding_a10 - RIL-7_LG10 GA161 SSR 10.40 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 GA161 SSR 77.88 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG10 GA161 SSR 9.80 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG10 GA161 SSR 11.00 (cM) Automated name-based View Maps
seq11D04 SSR 8.30 Groundnut - combined_corresponding_a10 - BC-1_a10 seq11D04 SSR 9.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-9_LG10 seq11D04 SSR 41.11 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 seq11D04 SSR 76.37 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-7_LG10 seq11D04 SSR 11.60 (cM) Automated name-based View Maps
seq4H11 SSR 9.80 Groundnut - Ref. consensus genetic map - a10 seq4H11 SSR 72.95 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-7_LG10 seq4H11 SSR 16.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 seq4H11 SSR 45.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-10_LG10 seq4H11 SSR 3.70 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG10 seq4H11 SSR 13.90 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG10 seq4H11 SSR 30.60 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG10 seq4H11 SSR 20.50 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - BC-1_b04 seq4H11 SSR 0.00 (cM) Automated name-based View Maps
TC1G04 SSR 12.40 Groundnut - Ref. consensus genetic map - a10 TC1G04 SSR 63.05 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-7_LG10 TC1G04 SSR 26.70 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG10 TC1G04 SSR 26.50 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG10 TC1G04 SSR 17.50 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG04 TC1G04 SSR 136.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-5_LG4 TC1G04 SSR 136.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - BC-1_a10 TC1G04 SSR 16.10 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG04 TC1G04 SSR 60.97 (cM) Automated name-based View Maps
TC11B04 SSR 16.00 Groundnut - RIL-1 - RIL-1_LG12 TC11B04 SSR 29.50 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a04 - BC-1_a04 TC11B04 SSR 52.90 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG04 TC11B04 SSR 30.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b05 TC11B04 SSR 92.81 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-5_LG4 TC11B04 SSR 17.90 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG10 TC11B04 SSR 43.70 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG12 TC11B04 SSR 29.50 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a10 TC11B04 SSR 32.78 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-1_LG12 TC11B04 SSR 29.50 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG10 TC11B04 SSR 22.20 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG04 TC11B04 SSR 20.07 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a10 - RIL-7_LG10 TC11B04 SSR 50.90 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG04 TC11B04 SSR 17.90 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a04 TC11B04 SSR 31.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-4_LG4 TC11B04 SSR 30.80 (cM) Automated name-based View Maps