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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Groundnut-combined_corresponding_b01
(Reference Set)
Min.
Correspondences
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Maps RIL-6_LG15
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - combined_corresponding_b01 [ View Map Set Info ]
Map Name: RIL-6_LG15
Map Start: 0.00 cM
Map Stop: 34.40 cM
Features by Type:
3 SSR
3 Total

Map Features

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Items 1 to 3 of 3.
Groundnut - combined_corresponding_b01 - RIL-6_LG15
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
seq13A07 SSR 34.40 Groundnut - combined_corresponding_b01 - RIL-1_LG1 seq13A07 SSR 37.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-7_LG15 seq13A07 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - BC-1_b01 seq13A07 SSR 26.10 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG01 seq13A07 SSR 37.10 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG01 seq13A07 SSR 101.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-4_LG1 seq13A07 SSR 46.10 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG01 seq13A07 SSR 28.61 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-5_LG1 seq13A07 SSR 54.60 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 seq13A07 SSR 72.98 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG01 seq13A07 SSR 46.10 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG01 seq13A07 SSR 54.60 (cM) Automated name-based View Maps
TC1A08 SSR 16.60 Groundnut - RIL-7 - RIL-7_LG15 TC1A08 SSR 17.80 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-10_LG11 TC1A08 SSR 11.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - BC-1_b01 TC1A08 SSR 25.50 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG15 TC1A08 SSR 16.60 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 TC1A08 SSR 132.43 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - RIL-7_LG15 TC1A08 SSR 12.10 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG11 TC1A08 SSR 24.00 (cM) Automated name-based View Maps
TC7H02 SSR 0.00 Groundnut - RIL-6 - RIL-6_LG15 TC7H02 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b01 - BC-1_b01 TC7H02 SSR 26.70 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b01 TC7H02 SSR 62.53 (cM) Automated name-based View Maps