CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-combined_corresponding_b04
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps RIL-6_LG1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - combined_corresponding_b04 [ View Map Set Info ]
Map Name: RIL-6_LG1
Map Start: 0.00 cM
Map Stop: 86.80 cM
Features by Type:
16 SSR
16 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 16 of 16.
Groundnut - combined_corresponding_b04 - RIL-6_LG1
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
TC11H06 SSR 86.80 Groundnut - RIL-5 - RIL-5_LG17 TC11H06 SSR 128.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-3_LG15 TC11H06 SSR 42.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-5_LG17 TC11H06 SSR 128.40 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG17 TC11H06 SSR 37.62 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG14 TC11H06 SSR 63.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-4_LG17 TC11H06 SSR 93.00 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG17 TC11H06 SSR 93.00 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG01 TC11H06 SSR 65.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 TC11H06 SSR 37.80 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG15 TC11H06 SSR 42.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-10_LG14 TC11H06 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG05 TC11H06 SSR 238.00 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG05 TC11H06 SSR 44.60 (cM) Automated name-based View Maps
seq12E10 SSR 81.50 Groundnut - RIL-6 - RIL-6_LG01 seq12E10 SSR 60.30 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG06 seq12E10 SSR 32.60 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 seq12E10 SSR 44.80 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a04 - BC-1_a04 seq12E10 SSR 41.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a04 seq12E10 SSR 97.30 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a04 - RIL-6_LG6 seq12E10 SSR 25.90 (cM) Automated name-based View Maps
EM-42 SSR 70.20 Groundnut - RIL-6 - RIL-6_LG01 EM-42 SSR 54.60 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 EM-42 SSR 108.88 (cM) Automated name-based View Maps
seq11H11 SSR 48.10 Groundnut - RIL-6 - RIL-6_LG01 seq11H11 SSR 39.30 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 seq11H11 SSR 115.24 (cM) Automated name-based View Maps
Ah-408 SSR 45.70 Groundnut - Ref. consensus genetic map - b04 Ah-408 SSR 125.49 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a04 Ah-408 SSR 142.81 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG01 Ah-408 SSR 37.00 (cM) Automated name-based View Maps
Ah-569 SSR 44.80 Groundnut - Ref. consensus genetic map - b04 Ah-569 SSR 127.72 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG01 Ah-569 SSR 36.30 (cM) Automated name-based View Maps
RN9C02 SSR 44.80 Groundnut - RIL-6 - RIL-6_LG01 RN9C02 SSR 36.20 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 RN9C02 SSR 125.55 (cM) Automated name-based View Maps
seq15C12 SSR 44.80 Groundnut - RIL-6 - RIL-6_LG01 seq15C12 SSR 36.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a04 - RIL-6_LG6 seq15C12 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-5_LG17 seq15C12 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG04 seq15C12 SSR 39.50 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG14 seq15C12 SSR 63.10 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - BC-1_b04 seq15C12 SSR 43.00 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG14 seq15C12 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG17 seq15C12 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG17 seq15C12 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG04 seq15C12 SSR 36.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-4_LG17 seq15C12 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a04 seq15C12 SSR 71.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a04 - RIL-9_LG4 seq15C12 SSR 27.70 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG06 seq15C12 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a04 - RIL-10_LG4 seq15C12 SSR 25.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-9_LG14 seq15C12 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 seq15C12 SSR 125.50 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-10_LG14 seq15C12 SSR 69.60 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG17 seq15C12 SSR 0.00 (cM) Automated name-based View Maps
seq17F06 SSR 42.50 Groundnut - RIL-3 - RIL-3 _LG15 seq17F06 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-5_LG17 seq17F06 SSR 116.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-3_LG15 seq17F06 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-4_LG17 seq17F06 SSR 74.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-10_LG14 seq17F06 SSR 35.50 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG17 seq17F06 SSR 74.70 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG17 seq17F06 SSR 116.60 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG17 seq17F06 SSR 26.26 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG05 seq17F06 SSR 211.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 seq17F06 SSR 99.54 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG05 seq17F06 SSR 79.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-7_LG1 seq17F06 SSR 1.80 (cM) Automated name-based View Maps
TC4E09 SSR 39.00 Groundnut - RIL-9 - RIL-9_LG14 TC4E09 SSR 63.10 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG17 TC4E09 SSR 19.45 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 TC4E09 SSR 106.80 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-7_LG1 TC4E09 SSR 4.70 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG01 TC4E09 SSR 29.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-10_LG14 TC4E09 SSR 38.90 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG17 TC4E09 SSR 43.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b04 - RIL-4_LG17 TC4E09 SSR 43.90 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG1 TC4E09 SSR 15.50 (cM) Automated name-based View Maps
seq8B09 SSR 29.10 Groundnut - Ref. consensus genetic map - b04 seq8B09 SSR 154.62 (cM) Automated name-based View Maps
PMc297 SSR 20.00 Groundnut - RIL-6 - RIL-6_LG01 PMc297 SSR 19.30 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 PMc297 SSR 170.05 (cM) Automated name-based View Maps
EM-88 SSR 18.90 Groundnut - Ref. consensus genetic map - b04 EM-88 SSR 18.90 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG01 EM-88 SSR 17.00 (cM) Automated name-based View Maps
PMc348 SSR 20.00 Groundnut - combined_corresponding_b05 - RIL-2_LG4 PMc348 SSR 46.10 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 PMc348 SSR 157.12 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG01 PMc348 SSR 18.20 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG04 PMc348 SSR 79.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b05 PMc348 SSR 99.04 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG04 PMc348 SSR 46.10 (cM) Automated name-based View Maps
gi-832 SSR 18.70 Groundnut - RIL-2 - RIL-2_LG05 gi-832 SSR 219.00 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG05 gi-832 SSR 73.25 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG15 gi-832 SSR 3.90 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG01 gi-832 SSR 15.70 (cM) Automated name-based View Maps
seq18C05 SSR 0.00 Groundnut - Ref. consensus genetic map - a04 seq18C05 SSR 115.79 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b04 seq18C05 SSR 177.66 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a07 seq18C05 SSR 38.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a07 - RIL-2_LG7 seq18C05 SSR 38.70 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG07 seq18C05 SSR 58.00 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG07 seq18C05 SSR 99.36 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG07 seq18C05 SSR 99.80 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG07 seq18C05 SSR 38.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a04 - RIL-1_LG7 seq18C05 SSR 58.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a04 - RIL-9_LG4 seq18C05 SSR 24.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a04 - RIL-3_LG7 seq18C05 SSR 99.80 (cM) Automated name-based View Maps