CMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-combined_corresponding_b05
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps BC-1_b05
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - combined_corresponding_b05 [ View Map Set Info ]
Map Name: BC-1_b05
Map Start: 0.00 cM
Map Stop: 26.10 cM
Features by Type:
8 SSR
8 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 8 of 8.
Groundnut - combined_corresponding_b05 - BC-1_b05
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Ah3TC19D09 SSR 0.00 Groundnut - Ref. consensus genetic map - a05 Ah3TC19D09 SSR 165.93 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b05 Ah3TC19D09 SSR 112.51 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a05 - BC-1_a05 Ah3TC19D09 SSR 7.60 (cM) Automated name-based View Maps
PM50 SSR 9.20 Groundnut - combined_corresponding_b05 - RIL-4_LG4 PM50 SSR 18.30 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b05 PM50 SSR 103.31 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG04 PM50 SSR 18.30 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG04 PM50 SSR 15.54 (cM) Automated name-based View Maps
IPAHM354 SSR 10.90 Groundnut - Ref. consensus genetic map - b05 IPAHM354 SSR 81.96 (cM) Automated name-based View Maps
seq19D06 SSR 19.60 Groundnut - RIL-1 - RIL-1_LG04 seq19D06 SSR 20.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-1_LG4 seq19D06 SSR 20.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-4_LG4 seq19D06 SSR 66.90 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG04 seq19D06 SSR 39.86 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b05 - RIL-5_LG4 seq19D06 SSR 81.50 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG04 seq19D06 SSR 81.50 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b05 seq19D06 SSR 35.60 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG04 seq19D06 SSR 66.90 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG04 seq19D06 SSR 20.70 (cM) Automated name-based View Maps
AC2C02_B1 SSR 20.90 Groundnut - BC-1 - BC-1_b05 AC2C02_B1 SSR 20.90 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b05 AC2C02_B1 SSR 34.30 (cM) Automated name-based View Maps
Ah3TC22F10 SSR 20.90 Groundnut - Ref. consensus genetic map - b05 Ah3TC22F10 SSR 34.30 (cM) Automated name-based View Maps
TC6E01 SSR 22.00 Groundnut - combined_corresponding_a05 - RIL-9_LG5 TC6E01 SSR 24.02 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG05 TC6E01 SSR 9.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a05 - RIL-5_LG5 TC6E01 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a05 - RIL-8_LG5 TC6E01 SSR 15.00 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG05 TC6E01 SSR 174.60 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG05 TC6E01 SSR 31.34 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a05 - RIL-4_LG5 TC6E01 SSR 96.90 (cM) Automated name-based View Maps
Groundnut - RIL-8 - RIL-8_LG05 TC6E01 SSR 17.70 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG05 TC6E01 SSR 96.90 (cM) Automated name-based View Maps
Groundnut - RIL-6 - RIL-6_LG12 TC6E01 SSR 39.00 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG05 TC6E01 SSR 91.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a05 - RIL-6_LG12 TC6E01 SSR 39.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a05 TC6E01 SSR 164.23 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG05 TC6E01 SSR 13.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a05 - RIL-3_LG5 TC6E01 SSR 9.60 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a05 - RIL-1_LG5 TC6E01 SSR 16.40 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG05 TC6E01 SSR 81.80 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG15 TC6E01 SSR 31.60 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG05 TC6E01 SSR 16.40 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b05 TC6E01 SSR 33.20 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a05 - BC-1_a05 TC6E01 SSR 5.90 (cM) Automated name-based View Maps
Groundnut - RIL-7 - RIL-7_LG05 TC6E01 SSR 0.00 (cM) Automated name-based View Maps
Ah3TC19E01 SSR 26.10 Groundnut - Ref. consensus genetic map - b05 Ah3TC19E01 SSR 29.10 (cM) Automated name-based View Maps