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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Groundnut-combined_corresponding_b06
(Reference Set)
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Maps RIL-8_LG12
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - combined_corresponding_b06 [ View Map Set Info ]
Map Name: RIL-8_LG12
Map Start: 0.00 cM
Map Stop: 70.80 cM
Features by Type:
6 SSR
6 Total

Map Features

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Items 1 to 6 of 6.
Groundnut - combined_corresponding_b06 - RIL-8_LG12
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
seq19E07 SSR 0.00 Groundnut - Ref. consensus genetic map - b06 seq19E07 SSR 33.79 (cM) Automated name-based View Maps
TC11A04 SSR 13.70 Groundnut - combined_corresponding_a06 - RIL-1_LG6 TC11A04 SSR 62.30 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b06 - BC-1_b06 TC11A04 SSR 210.70 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG06 TC11A04 SSR 62.30 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG10 TC11A04 SSR 57.90 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG06 TC11A04 SSR 62.30 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG10 TC11A04 SSR 31.85 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b06 TC11A04 SSR 45.91 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG06 TC11A04 SSR 69.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a06 - BC-1_a06 TC11A04 SSR 15.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b06 - RIL-4_LG10 TC11A04 SSR 74.30 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a06 - RIL-9_LG6 TC11A04 SSR 83.20 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG10 TC11A04 SSR 74.30 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a06 TC11A04 SSR 148.59 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG06 TC11A04 SSR 0.30 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b06 - RIL-5_LG10 TC11A04 SSR 57.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a06 - RIL-2_LG6 TC11A04 SSR 0.30 (cM) Automated name-based View Maps
PM210 SSR 14.20 Groundnut - combined_corresponding_b06 - BC-1_b06 PM210 SSR 29.50 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b06 PM210 SSR 49.71 (cM) Automated name-based View Maps
Groundnut - RIL-8 - RIL-8_LG12 PM210 SSR 10.30 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG06 PM210 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a06 - RIL-9_LG6 PM210 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b06 - RIL-10_LG16 PM210 SSR 10.40 (cM) Automated name-based View Maps
Groundnut - RIL-9 - RIL-9_LG16 PM210 SSR 15.40 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a06 PM210 SSR 275.79 (cM) Automated name-based View Maps
PM137 SSR 21.10 Groundnut - RIL-9 - RIL-9_LG16 PM137 SSR 15.40 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG10 PM137 SSR 66.80 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b06 PM137 SSR 55.41 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG10 PM137 SSR 45.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b06 - RIL-10_LG16 PM137 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b06 - RIL-5_LG10 PM137 SSR 45.70 (cM) Automated name-based View Maps
Groundnut - RIL-8 - RIL-8_LG12 PM137 SSR 16.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b06 - RIL-4_LG10 PM137 SSR 66.80 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG10 PM137 SSR 24.74 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b06 - BC-1_b06 PM137 SSR 19.10 (cM) Automated name-based View Maps
GA2 SSR 32.30 Groundnut - RIL-8 - RIL-8_LG12 GA2 SSR 36.10 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b06 GA2 SSR 63.30 (cM) Automated name-based View Maps
PM1071 SSR 70.80 No other positions