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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Groundnut-combined_corresponding_b10
(Reference Set)
Min.
Correspondences
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Maps RIL-9_LG16
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - combined_corresponding_b10 [ View Map Set Info ]
Map Name: RIL-9_LG16
Map Start: 0.00 cM
Map Stop: 64.56 cM
Features by Type:
10 SSR
10 Total

Map Features

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Items 1 to 10 of 10.
Groundnut - combined_corresponding_b10 - RIL-9_LG16
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
IPAHM24 SSR 0.00 Groundnut - combined_corresponding_b10 - RIL-5_LG12 IPAHM24 SSR 44.50 (cM) Automated name-based View Maps
ARS771 SSR 1.40 Groundnut - Ref. consensus genetic map - b10 ARS771 SSR 82.47 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG16 ARS771 SSR 5.20 (cM) Automated name-based View Maps
GM690 SSR 6.90 Groundnut - RIL-10 - RIL-10_LG16 GM690 SSR 9.70 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b10 GM690 SSR 88.07 (cM) Automated name-based View Maps
AC2B04 SSR 10.92 Groundnut - combined_corresponding_b10 - BC-1_b10 AC2B04 SSR 10.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-7_LG7 AC2B04 SSR 27.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-6_LG7 AC2B04 SSR 11.40 (cM) Automated name-based View Maps
GM678 SSR 29.22 Groundnut - Ref. consensus genetic map - b10 GM678 SSR 110.39 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG16 GM678 SSR 22.00 (cM) Automated name-based View Maps
GM1742 SSR 47.56 Groundnut - Ref. consensus genetic map - b10 GM1742 SSR 118.73 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG16 GM1742 SSR 30.30 (cM) Automated name-based View Maps
GM2165 SSR 48.76 Groundnut - Ref. consensus genetic map - b10 GM2165 SSR 119.93 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG16 GM2165 SSR 33.20 (cM) Automated name-based View Maps
IPAHM475 SSR 40.26 Groundnut - combined_corresponding_b10 - RIL-5_LG12 IPAHM475 SSR 74.20 (cM) Automated name-based View Maps
Groundnut - RIL-10 - RIL-10_LG16 IPAHM475 SSR 37.80 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG12 IPAHM475 SSR 74.20 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b10 IPAHM475 SSR 121.43 (cM) Automated name-based View Maps
Groundnut - Consensus_Biotic - LG12 IPAHM475 SSR 42.50 (cM) Automated name-based View Maps
GM2042 SSR 44.26 Groundnut - combined_corresponding_b10 - RIL-5_LG12 GM2042 SSR 95.40 (cM) Automated name-based View Maps
GM1284 SSR 64.56 No other positions