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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Groundnut-combined_corresponding_b10
(Reference Set)
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Correspondences
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Maps BC-1_b10
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 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
SSR
Other
 
Show Labels: None Landmarks All
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Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
Synteny
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Groundnut - combined_corresponding_b10 [ View Map Set Info ]
Map Name: BC-1_b10
Map Start: 0.00 cM
Map Stop: 45.10 cM
Features by Type:
10 SSR
10 Total

Map Features

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Items 1 to 10 of 10.
Groundnut - combined_corresponding_b10 - BC-1_b10
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Ah4TC24H10 SSR 0.00 No other positions
AC4F07 SSR 2.40 No other positions
TC4E05 SSR 7.00 Groundnut - combined_corresponding_b10 - RIL-7_LG7 TC4E05 SSR 24.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-4_LG12 TC4E05 SSR 19.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-5_LG12 TC4E05 SSR 19.40 (cM) Automated name-based View Maps
IPAHM689 SSR 7.00 Groundnut - Ref. consensus genetic map - b10 IPAHM689 SSR 47.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a06 - RIL-3_LG6 IPAHM689 SSR 10.80 (cM) Automated name-based View Maps
Groundnut - RIL-2 - RIL-2_LG06 IPAHM689 SSR 79.90 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - a06 IPAHM689 SSR 260.19 (cM) Automated name-based View Maps
Groundnut - RIL-3 - RIL-3 _LG06 IPAHM689 SSR 10.80 (cM) Automated name-based View Maps
Groundnut - Consensus_Abiotic - LG06 IPAHM689 SSR 157.95 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a06 - RIL-1_LG6 IPAHM689 SSR 35.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_a06 - RIL-2_LG6 IPAHM689 SSR 79.90 (cM) Automated name-based View Maps
Groundnut - RIL-1 - RIL-1_LG06 IPAHM689 SSR 35.70 (cM) Automated name-based View Maps
Ah4TC24F04 SSR 7.00 No other positions
Ah4TC41C09 SSR 8.20 No other positions
AC2B04 SSR 10.00 Groundnut - combined_corresponding_b10 - RIL-9_LG16 AC2B04 SSR 10.92 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-7_LG7 AC2B04 SSR 27.40 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-6_LG7 AC2B04 SSR 11.40 (cM) Automated name-based View Maps
seq7H06 SSR 18.40 Groundnut - Consensus_Biotic - LG12 seq7H06 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-7_LG7 seq7H06 SSR 45.90 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-5_LG12 seq7H06 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-4 - RIL-4_LG12 seq7H06 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - Ref. consensus genetic map - b10 seq7H06 SSR 16.70 (cM) Automated name-based View Maps
Groundnut - combined_corresponding_b10 - RIL-4_LG12 seq7H06 SSR 0.00 (cM) Automated name-based View Maps
Groundnut - RIL-5 - RIL-5_LG12 seq7H06 SSR 0.00 (cM) Automated name-based View Maps
Ah4TC48F01 SSR 45.10 No other positions
Ah4TC22G05 SSR 45.10 No other positions